Package: pssp 0.2.0

Ty Garber

pssp: Package to interface with the WDFW Puget Sound sampling database

The pssp package serves as an interface between R and the Puget Sound sampling database. It"s goal is to ease the burden of retrieving and analyzing sport creel information in Puget Sound.

Authors:Ty Garber [aut, cre]

pssp_0.2.0.tar.gz
pssp_0.2.0.zip(r-4.5)pssp_0.2.0.zip(r-4.4)pssp_0.2.0.zip(r-4.3)
pssp_0.2.0.tgz(r-4.4-any)pssp_0.2.0.tgz(r-4.3-any)
pssp_0.2.0.tar.gz(r-4.5-noble)pssp_0.2.0.tar.gz(r-4.4-noble)
pssp_0.2.0.tgz(r-4.4-emscripten)pssp_0.2.0.tgz(r-4.3-emscripten)
pssp.pdf |pssp.html✨
pssp/json (API)

# Install 'pssp' in R:
install.packages('pssp', repos = c('https://framverse.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/framverse/pssp/issues

On CRAN:

2.40 score 46 exports 80 dependencies

Last updated 19 hours agofrom:a73c7a8c07. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 22 2024
R-4.5-winOKNov 22 2024
R-4.5-linuxOKNov 22 2024
R-4.4-winOKNov 22 2024
R-4.4-macOKNov 22 2024
R-4.3-winOKNov 22 2024
R-4.3-macOKNov 22 2024

Exports:add_time_stepsaerial_estimatoraerial_estimator_statsaerial_pullbs_mapbs_pullbs_site_weightsbs_site_weights_inbs_site_weights_outcalculate_total_lengthcheck_freshnessds_bio_pullds_encountersds_filter_insampleds_filter_insample_aerialds_filter_insample_murthyds_historical_cpue_chartds_pull_sampling_effortds_releases_pullds_salmon_summaryds_sampling_effort_sampler_summaryds_sampling_effort_summaryidentify_in_samplemanagement_weekmarine_pullpssp_last_updatepssp_querypssp_refresh_datastatistical_weektf_cvtf_descriptive_lengthtf_effort_summary_weektf_histtf_interagency_chisqtf_interagency_histogramtf_interagency_lm_summarytf_interagency_summarytf_lm_summarytf_lm_summary_weektf_maptf_mortalilitytf_pulltf_pvalue_historytf_scattertf_summaryvtr_pull

Dependencies:backportsbase64encbitbit64blobbroombslibcachemclicolorspacecpp11crosstalkDBIdigestdplyrevaluatefansifarverfastmapfontawesomefsgenericsggplot2gluegtablehighrhmshtmltoolshtmlwidgetsisobandjanitorjquerylibjsonliteknitrlabelinglatticelazyevalleafletleaflet.extrasleaflet.providerslifecyclelubridatemagrittrMASSMatrixmemoisemgcvmimemunsellnlmeodbcpillarpkgconfigpngpurrrR6rappdirsrasterRColorBrewerRcpprlangrmarkdownsassscalessnakecasespstringistringrterratibbletidyrtidyselecttimechangetinytexutf8vctrsviridisLitewithrxfunyaml

Readme and manuals

Help Manual

Help pageTopics
Add timestep columns to a dataframeadd_time_steps
Aerial Estimator Tableaerial_estimator
Aerial Estimator Tableaerial_estimator_stats
Aerial data pullaerial_pull
Effort mapbs_map
Downloads test fishing data from psspbs_pull
Calculates site weightsbs_site_weights
Calculates in-sample site weightsbs_site_weights_in
Calculates out-of-sample site weightsbs_site_weights_out
Total length calculation for fork lengthcalculate_total_length
Checks if data is currentcheck_freshness
Pulls a biological infomartionds_bio_pull
Pulls the dockside encountersds_encounters
In-Sample filterds_filter_insample
In-Sample filter (Aerial)ds_filter_insample_aerial
In-Sample filter (Murthy)ds_filter_insample_murthy
Makes a chart comparing current year CPUE vs previous yearsds_historical_cpue_chart
Get sampling effort datads_pull_sampling_effort
Pulls release information for chinook and coho with legal size statusds_releases_pull
Downloads test fishing data from psspds_salmon_summary
Sampling effort summary with added samplerds_sampling_effort_sampler_summary
Sampling effort summaryds_sampling_effort_summary
In-Sample idenifieridentify_in_sample
Vectorized approach to calculating the management week, returns an integermanagement_week
Pulls non-salmon related datamarine_pull
Gets the last time materialized views we updatedpssp_last_update
Queries the pssp databasepssp_query
Refreseshs datasourcespssp_refresh_data
Vectorized approach to calculating the statistical week, returns an integerstatistical_week
CV of Legal Marked Categorytf_cv
Descriptive statistics of lengthstf_descriptive_length
Test Fishing Weekly Efforttf_effort_summary_week
Test fishing length histogramtf_hist
Interagency Fisher / Chi Square Testtf_interagency_chisq
Histogram comparison between agencies by lengthtf_interagency_histogram
Iteragency legal mark summarytf_interagency_lm_summary
Iteragency summarytf_interagency_summary
Summarize by Legal Mark categorytf_lm_summary
Test Fishing Weekly encounterstf_lm_summary_week
Map of test fishing encounerstf_map
Mortality ratiotf_mortalility
Downloads test fishing data from pssptf_pull
Line plot of p-values from Chi-squaretf_pvalue_history
Creates a ggplot scatter plot of test fishing lengths by adipose cliptf_scatter
Test Fishing Weekly Summarytf_summary
Downloads VTR data from psspvtr_pull